MHeming
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  • Publications
    • Single-Cell Transcriptomics Identifies a Prominent Role for the MIF-CD74 Axis in Myasthenia Gravis Thymus.
    • Atlas of cerebrospinal fluid immune cells across neurological diseases.
    • Activated αβ T- and reduced mucosa-associated invariant T cells in LGI1- and CASPR2-encephalitis.
    • GateNet: A novel neural network architecture for automated flow cytometry gating.
    • Association of symptom severity and cerebrospinal fluid alterations in recent onset psychosis in schizophrenia-spectrum disorders - An individual patient data meta-analysis.
    • Severe CSF immune cell alterations in cryptococcal meningitis gradually resolve during antifungal therapy.
    • Cell-mediated cytotoxicity within CSF and brain parenchyma in spinal muscular atrophy unaltered by nusinersen treatment.
    • Single-cell analysis of anti-BCMA CAR T cell therapy in patients with central nervous system autoimmunity.
    • B cell lineage reconstitution underlies CAR-T cell therapeutic efficacy in patients with refractory myasthenia gravis.
    • Alemtuzumab treatment exemplifies discordant immune effects of blood and cerebrospinal fluid in multiple sclerosis.
    • Learning multiple sclerosis immunopathogenesis from anti-CD20 therapy
    • Supporting the differential diagnosis of connective tissue diseases with neurological involvement by blood and cerebrospinal fluid flow cytometry
    • Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma
    • High-dimensional investigation of the cerebrospinal fluid to explore and monitor CNS immune responses.
    • Stroke induces disease-specific myeloid cells in the brain parenchyma and pia
    • Intraocular dendritic cells characterize HLA-B27-associated acute anterior uveitis
    • Bcl6 controls meningeal Th17-B cell interaction in murine neuroinflammation.
    • Cerebrospinal fluid flow cytometry distinguishes psychosis spectrum disorders from differential diagnoses
    • Single-cell profiling of CNS border compartment leukocytes reveals that B cells and their progenitors reside in non-diseased meninges.
    • Neurological Manifestations of COVID-19 Feature T Cell Exhaustion and Dedifferentiated Monocytes in Cerebrospinal Fluid
    • Leukocyte profiles in blood and CSF distinguish neurosarcoidosis from multiple sclerosis
    • Redefining the heterogeneity of peripheral nerve cells in health and autoimmunity.
    • Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis
    • Pretreatment anti-thyroid autoantibodies indicate increased risk for thyroid autoimmunity secondary to alemtuzumab: A prospective cohort study
    • Immune cell profiling of the cerebrospinal fluid provides pathogenetic insights into inflammatory neuropathies
    • Peroxisome Proliferator-Activated Receptor-γ Modulates the Response of Macrophages to Lipopolysaccharide and Glucocorticoids
    • An example journal article
  • Projects
    • Human PNS Atlas
    • CerebroAppLite
    • scMisc
    • Primary CNS lymphoma
    • Stroke
    • Uveitis
    • Meninges
    • Neuro-COVID
    • Murine peripheral nerve
    • Neurosarcoidosis

scMisc

Mar 1, 2025 · 1 min read
Go to Project Site

R package that provides helper functions for single cell RNA-seq analysis.

Last updated on Mar 1, 2025
Michael Heming
Authors
Michael Heming
Clinicial Scientist
← CerebroAppLite Mar 1, 2025
Primary CNS lymphoma Sep 24, 2022 →

© 2025 Michael Heming. This work is licensed under CC BY NC ND 4.0

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